commit 110b8b0969453e4fc6a20359078c5f64ad122b29
Author: Maxime Alves LIRMM <maxime.alves@lirmm.fr>
Date:   Tue Jun 30 17:50:35 2020 +0200

    commit initial

diff --git a/README.md b/README.md
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+# halfAPI
+
+This Python-based ASGI application aims to provide the core functionality to
+multiple API domains.
+
+It's developed at the [LIRMM](https://lirmm.fr) in Montpellier, France.
+
+The name "halfAPI" comes from the deep relationship between it and
+[halfORM](https://gite.lirmm.fr/newsi/halfORM), a project authored by 
+[Joël Maizi](https://gite.lirmm.fr/maizi).
diff --git a/halfapi/__init__.py b/halfapi/__init__.py
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+__version__ = '0.0.0'
diff --git a/halfapi/__pycache__/__init__.cpython-38.pyc b/halfapi/__pycache__/__init__.cpython-38.pyc
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diff --git a/halfapi/__pycache__/cli.cpython-38.pyc b/halfapi/__pycache__/cli.cpython-38.pyc
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diff --git a/halfapi/acl.py b/halfapi/acl.py
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+#!/usr/bin/env python3
+class BaseACL:
+    """ Base ACL class that contains generic methods for domains ACL
+    """
+
+    def public(self, *args) -> bool:
+        "Unlimited access"
+        return True
diff --git a/halfapi/app.py b/halfapi/app.py
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+++ b/halfapi/app.py
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+#!/usr/bin/env python3
+# builtins
+import importlib
+import sys
+
+# asgi framework
+from starlette.applications import Starlette
+from starlette.exceptions import HTTPException
+from starlette.middleware import Middleware
+from starlette.middleware.base import BaseHTTPMiddleware
+from starlette.requests import Request
+from starlette.responses import Response
+from starlette.routing import Route, Match, Mount
+from starlette.types import ASGIApp, Receive, Scope, Send
+
+# typing
+from typing import Any, Awaitable, Callable, MutableMapping
+RequestResponseEndpoint = Callable[ [Request], Awaitable[Response] ]
+
+# hop-generated classes
+from apidb.api.acl_function import AclFunction
+from apidb.api.domain import Domain
+from apidb.api.route import Route
+from apidb.api.view.acl import Acl as AclView
+from apidb.api.view.route import Route as RouteView
+
+# module libraries
+from .lib.responses import ForbiddenResponse, NotFoundResponse
+
+def match_route(app: ASGIApp, scope: Scope):
+    """ Checks all routes from "app" and checks if it matches with the one from
+        scope
+
+        Parameters:
+
+            - app (ASGIApp): The Starlette object
+            - scope (MutableMapping[str, Any]): The requests scope
+
+        Returns:
+
+            - (dict, dict): The first dict of the tuple is the details on the
+                route, the second one is the path parameters
+
+        Raises:
+
+            HTTPException
+    """
+
+    """ The *result* variable is fitted to the filter that will be applied when
+        searching the route in the database. 
+        Refer to the database documentation for more details on the api.route 
+        table.
+    """
+    result = {
+        'domain': None,
+        'name': None,
+        'http_verb': None,
+        'version': None
+    }
+
+    try:
+        """ Identification of the parts of the path
+
+            Examples :
+                version : v4
+                domain : organigramme
+                path : laboratoire/personnel
+        """
+        _, result['version'], result['domain'], path = scope['path'].split('/', 3)
+    except ValueError as e:
+        #404 Not found
+        raise HTTPException(404)
+
+    # Prefix the path with "/"
+    path = f'/{path}'
+
+    for route in app.routes:
+        # Parse all routes
+        match = route.matches(scope)
+        if match[0] != Match.FULL:
+            continue
+
+        if type(route) != Mount:
+            """ The root app should not have exposed routes,
+                only the mounted domains have some.
+            """
+            continue
+
+        """ Clone the scope to assign the path to the path without the
+            matching domain.
+        """
+        subscope = scope.copy()
+        subscope['path'] = path
+
+        for mount_route in route.routes:
+            # Parse all domain routes
+            submatch = mount_route.matches(subscope)
+            if submatch[0] != Match.FULL:
+                continue
+
+            # Route matches
+            result['name'] = submatch[1]['endpoint'].__name__
+            result['http_verb'] = scope['method']
+
+            return result, submatch[1]['path_params']
+
+    raise HTTPException(404)
+
+
+class AclCallerMiddleware(BaseHTTPMiddleware):
+    async def __call__(self, scope:Scope, receive: Receive, send: Send) -> None:
+        """ Points out to the domain which ACL function it should call
+
+            Parameters :
+            
+                - request (Request): The current request
+                
+                - call_next (RequestResponseEndpoint): The next middleware/route function
+
+            Return:
+                Response
+        """
+        print('Hit AclCallerMiddleware of API')
+        if scope['type'] != 'http':
+            await self.app(scope, receive, send)
+            return
+        
+
+        if scope['path'].split('/')[-1] not in ['docs','openapi.json','redoc']:
+            # routes in the the database, the others being
+            # docs/openapi.json/redoc
+            try:
+                d_match, path_params = match_route(app, scope)
+            except HTTPException:
+                return NotFoundResponse()
+
+            d_match, path_params = match_route(app, scope)
+
+            try:
+                scope['acls'] = []
+                """
+                for acl in AclView(**d_match).select():
+                    if ('acl_function_name' not in acl.keys()
+                    or 'domain' not in acl.keys()):
+                        continue
+
+                    scope['acls'].append(acl['acl_function_name'])
+                acl_module = importlib.import_module(
+                    '.acl',
+                    'organigramme'
+                )
+
+                try:
+                    acl_functions.append(
+                        getattr(acl_module.acl, acl_function_name))
+                except AttributeError:
+                    
+
+                if True: #function(AUTH, path_params):
+                    response = await call_next(request)
+                    break
+                """
+            except StopIteration:
+                # TODO : No ACL sur une route existante, prevenir l'admin?
+                print("No ACL")
+                pass
+
+        return await self.app(scope, receive, send)
+
+
+def mount_domains(app: Starlette, domains: list):
+    """ Procedure to mount the registered domains on their prefixes
+
+        Parameters:
+
+            - app (FastAPI): The FastAPI object
+            - domains (list): The domains to mount, retrieved from the database
+              with their attributes "version", "name"
+        
+        Returns: Nothing
+    """
+
+    for domain in domains:
+        if 'name' not in domain.keys() or 'version' not in domain.keys():
+            continue
+
+        # Retrieve domain app according to domain details
+        try:
+            domain_app = importlib.import_module(
+                f'{domain["name"]}.app').app
+        except ModuleNotFoundError:
+            sys.stderr.write(
+                f'Could not find module *{domain["name"]}* in sys.path\n')
+            continue
+        except ImportError:
+            sys.stderr.write(f'Could not import *app* from *{domain}*')
+            continue
+
+        # Alter the openapi_url so the /docs page doesn't try to get
+        # /{name}/openapi.json (@TODO : retport the bug to FastAPI)
+        # domain_app.openapi_url = '/../api/{version}/{name}/openapi.json'.format(**domain)
+
+        # Mount the domain app on the prefix
+        # e.g. : /v4/organigramme
+        app.mount('/{version}/{name}'.format(**domain), domain_app)
+
+
+def startup():
+    # Mount the registered domains
+    try:
+        domains_list = [elt for elt in Domain().select()]
+        mount_domains(app, domains_list)
+    except Exception as e:
+        sys.stderr.write('Error in the *domains* retrieval') 
+        sys.stderr.write(str(e)) 
+        sys.exit(1)
+
+app = Starlette(
+    middleware=[Middleware(AclCallerMiddleware)],
+    on_startup=[startup]
+)
diff --git a/halfapi/cli.py b/halfapi/cli.py
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+#!/usr/bin/env python3
+import click
+import uvicorn
+import os
+import sys
+
+CONTEXT_SETTINGS={
+    'default_map':{'run': {'port': 8000}} 
+}
+
+@click.group(invoke_without_command=True, context_settings=CONTEXT_SETTINGS)
+@click.pass_context
+def cli(ctx):
+    if ctx.invoked_subcommand is None: 
+        return run()
+
+@click.option('--host', default='127.0.0.1')
+@click.option('--port', default='8000')
+@click.option('--debug', default=False)
+@click.option('--dev', default=True)
+@cli.command()
+def run(host, port, debug, dev):
+    if dev:
+        debug = True
+        reload = True
+        log_level = 'debug'
+    else:
+        reload = False
+        log_level = 'info'
+
+    click.echo('Launching application with default parameters')
+    click.echo(f'''Parameters : \n
+    Host : {host}
+    Port : {port}
+    Debug : {debug}
+    Dev : {dev}''')
+    
+    sys.path.insert(0, os.getcwd())
+    click.echo(sys.path)
+    uvicorn.run('halfapi.app:app', 
+        host=host,
+        port=int(port),
+        log_level=log_level,
+        reload=reload)
+
+if __name__ == '__main__':
+    cli()
+
diff --git a/halfapi/lib/__pycache__/query.cpython-38.pyc b/halfapi/lib/__pycache__/query.cpython-38.pyc
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diff --git a/halfapi/lib/__pycache__/responses.cpython-38.pyc b/halfapi/lib/__pycache__/responses.cpython-38.pyc
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diff --git a/halfapi/lib/query.py b/halfapi/lib/query.py
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+++ b/halfapi/lib/query.py
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+#!/usr/bin/env python3
+from starlette.exceptions import HTTPException
+from .responses import CSVResponse
+
+"""
+This is the *query* library that contains all the useful functions to treat our
+queries
+"""
+
+def parse_query(q: str = ""):
+    """
+    Returns the fitting Response object according to query parameters.
+
+    The parse_query function handles the following arguments in the query 
+    string : format, limit, and offset
+    It returns a callable function that returns the desired Response object.
+
+        Parameters:
+            q (str): The query string "q" parameter, in the format
+                key0:value0|...|keyN:valueN
+
+        Returns:
+            Callable[[half_orm.model.Model], Response]
+
+        Available query arguments:
+            format:
+                - csv
+                - json
+            limit: int > 0
+            offset: int > 0
+
+
+        Examples:
+
+            >>> parse_query()
+            <function parse_query.<locals>.select at 0x...>
+
+            >>> parse_query('format:csv')
+            <function parse_query.<locals>.select at 0x...>
+
+            >>> parse_query('format:json')
+            <function parse_query.<locals>.select at 0x...>
+
+            >>> parse_query('format:csv|limit:10')
+            <function parse_query.<locals>.select at 0x...>
+
+            >>> parse_query('format:csv|offset:10')
+            <function parse_query.<locals>.select at 0x...>
+
+            >>> parse_query('format:csv|limit:10|offset:10')
+            <function parse_query.<locals>.select at 0x...>
+
+            >>> parse_query('limit:10')
+            <function parse_query.<locals>.select at 0x...>
+
+            >>> parse_query('limit=10')
+            Traceback (most recent call last):
+                ...
+            fastapi.exceptions.HTTPException: 400
+
+
+    """
+
+    params = {}
+    if len(q) > 0:
+        try:
+            split_ = lambda x : x.split(':')
+            params = dict(map(split_, q.split('|')))
+        except ValueError:
+            raise HTTPException(400)
+        split_ = lambda x : x.split(':')
+        params = dict(map(split_, q.split('|')))
+
+    def select(obj):
+
+        if 'limit' in params and int(params['limit']) > 0:
+            obj.limit(int(params['limit']))
+
+        if 'offset' in params and int(params['offset']) > 0:
+            obj.offset(int(params['offset']))
+
+        if 'format' in params and params['format'] == 'csv':
+            return CSVResponse([elt for elt in obj.select()])
+
+        return [elt for elt in obj.select()]
+
+    return select
diff --git a/halfapi/lib/responses.py b/halfapi/lib/responses.py
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+++ b/halfapi/lib/responses.py
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+#!/usr/bin/env python3
+# builtins
+import csv
+from datetime import date
+from io import TextIOBase, StringIO
+
+# asgi framework
+from starlette.responses import Response
+
+class NotFoundResponse(Response):
+    """ The 404 Not Found default Response  
+    """
+    def __init__(self):
+        super().__init__(status_code=404)
+
+class ForbiddenResponse(Response):
+    """ The 401 Not Found default Response  
+    """
+    def __init__(self):
+        super().__init__(status_code = 401)
+
+class CSVResponse(Response):
+    def __init__(self, obj):
+        
+        with StringIO() as csv_file:
+            csv_obj = csv.writer(csv_file, dialect="excel")
+            csv_obj.writerows([elt.values() for elt in obj])
+            filename = f'Personnels_LIRMM-{date.today()}.csv'
+
+            super().__init__(
+                content=csv_file.getvalue(),
+                headers={ 
+                    'Content-Type': 'text/csv; charset=UTF-8',
+                    'Content-Disposition': f'attachment; filename="{filename}"'},
+                status_code = 200)
diff --git a/requirements.txt b/requirements.txt
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+++ b/requirements.txt
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+starlette
+uvicorn
+apidb @ git+ssh://git@gite.lirmm.fr/newsi/db/hop_api.git
diff --git a/setup.py b/setup.py
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+++ b/setup.py
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+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+
+import os
+import re
+
+from setuptools import setup, find_packages
+
+
+def get_version(package):
+    """
+    Return package version as listed in `__version__` in `init.py`.
+    """
+    with open(os.path.join(package, "__init__.py")) as f:
+        return re.search("__version__ = ['\"]([^'\"]+)['\"]", f.read()).group(1)
+
+
+def get_long_description():
+    """
+    Return the README.
+    """
+    with open("README.md", encoding="utf8") as f:
+        return f.read()
+
+
+def get_packages(package):
+    """
+    Return root package and all sub-packages.
+    """
+    return [
+        dirpath
+        for dirpath, dirnames, filenames in os.walk(package)
+        if os.path.exists(os.path.join(dirpath, "__init__.py"))
+    ]
+
+module_name="halfapi"
+setup(
+    name=module_name,
+    python_requires=">=3.7",
+    version=get_version(module_name),
+    url="https://gite.lirmm.fr/newsi/api/halfapi",
+    long_description=get_long_description(),
+    long_description_content_type="text/markdown",
+    packages=get_packages(module_name),
+    package_data={
+        'halfapi': ['lib/*']
+    },
+    install_requires=[
+        "apidb",
+        "click",
+        "starlette",
+        "uvicorn"],
+    extras_require={
+        "tests":["pytest", "requests"]
+    },
+    entry_points={
+        "console_scripts":[
+            "halfapi=halfapi.cli:cli"
+        ]
+    }
+)